Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SUSD3Q96L08 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SUSD3Q96L08 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SUSD3Q96L08 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SUSD3Q96L08 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SUSD3Q96L08 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.97■□□□□ 0.63
SUSD3Q96L08 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SUSD3Q96L08 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SUSD3Q96L08 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SUSD3Q96L08 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.97■□□□□ 0.63
SUSD3Q96L08 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUSD3Q96L08 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUSD3Q96L08 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.96■□□□□ 0.63
SUSD3Q96L08 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.96■□□□□ 0.63
SUSD3Q96L08 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.96■□□□□ 0.63
SUSD3Q96L08 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SUSD3Q96L08 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SUSD3Q96L08 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUSD3Q96L08 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.96■□□□□ 0.63
SUSD3Q96L08 HNRNPDP1-201ENST00000439535 754 ntBASIC18.96■□□□□ 0.63
SUSD3Q96L08 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.96■□□□□ 0.63
SUSD3Q96L08 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.96■□□□□ 0.63
SUSD3Q96L08 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.96■□□□□ 0.63
SUSD3Q96L08 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.96■□□□□ 0.63
SUSD3Q96L08 AD001527.2-201ENST00000622994 785 ntBASIC18.96■□□□□ 0.63
SUSD3Q96L08 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUSD3Q96L08 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUSD3Q96L08 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUSD3Q96L08 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
SUSD3Q96L08 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SUSD3Q96L08 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SUSD3Q96L08 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.96■□□□□ 0.63
SUSD3Q96L08 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 PMPCAP1-201ENST00000508114 1576 ntBASIC18.95■□□□□ 0.62
SUSD3Q96L08 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 AL590627.1-203ENST00000421194 1026 ntBASIC18.95■□□□□ 0.62
SUSD3Q96L08 AC103564.2-201ENST00000432853 1299 ntBASIC18.95■□□□□ 0.62
SUSD3Q96L08 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 FAM215A-202ENST00000632077 792 ntBASIC18.95■□□□□ 0.62
SUSD3Q96L08 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.95■□□□□ 0.62
SUSD3Q96L08 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SUSD3Q96L08 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 REXO1L9P-201ENST00000604264 2108 ntBASIC18.94■□□□□ 0.62
SUSD3Q96L08 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 NKAPP1-205ENST00000585790 367 ntBASIC18.94■□□□□ 0.62
SUSD3Q96L08 AC120114.3-201ENST00000611923 658 ntBASIC18.94■□□□□ 0.62
SUSD3Q96L08 MIR7706-201ENST00000613747 67 ntBASIC18.94■□□□□ 0.62
SUSD3Q96L08 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.94■□□□□ 0.62
SUSD3Q96L08 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SUSD3Q96L08 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms