Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CHMP6Q96FZ7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 AP000593.1-201ENST00000393668 712 ntBASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHMP6Q96FZ7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 KRT18P6-201ENST00000555540 1265 ntBASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP6Q96FZ7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHMP6Q96FZ7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 AC093010.1-201ENST00000473625 1624 ntBASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms