Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 DUTP2-201ENST00000519164 463 ntBASIC16.12■□□□□ 0.17
CPNE4Q96A23 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 TPSP2-201ENST00000561760 610 ntBASIC16.12■□□□□ 0.17
CPNE4Q96A23 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 Z69720.1-201ENST00000601483 472 ntBASIC16.12■□□□□ 0.17
CPNE4Q96A23 AC092119.3-201ENST00000612618 583 ntBASIC16.12■□□□□ 0.17
CPNE4Q96A23 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE4Q96A23 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CPNE4Q96A23 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 LINC00265-3P-201ENST00000447588 903 ntBASIC16.11■□□□□ 0.17
CPNE4Q96A23 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 AC068472.1-201ENST00000474589 881 ntBASIC16.11■□□□□ 0.17
CPNE4Q96A23 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 MIR3180-1-201ENST00000580374 94 ntBASIC16.11■□□□□ 0.17
CPNE4Q96A23 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 MIR3180-3-201ENST00000584616 94 ntBASIC16.11■□□□□ 0.17
CPNE4Q96A23 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CPNE4Q96A23 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE4Q96A23 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE4Q96A23 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 MTCL1P1-201ENST00000446207 792 ntBASIC16.1■□□□□ 0.17
CPNE4Q96A23 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.1■□□□□ 0.17
CPNE4Q96A23 TOB2P1-201ENST00000469761 992 ntBASIC16.1■□□□□ 0.17
CPNE4Q96A23 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms