Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATRIPQ8WXE1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 CCR12P-201ENST00000446203 998 ntBASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATRIPQ8WXE1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 AC141586.5-201ENST00000624546 2050 ntBASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 SLC25A6P5-201ENST00000435663 894 ntBASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 PRORSD1P-202ENST00000563365 2154 ntBASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.8■□□□□ 0.76
ATRIPQ8WXE1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 OR6D1P-202ENST00000641007 5290 ntBASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 HCG4P8-203ENST00000443049 980 ntBASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 FAM86EP-206ENST00000510506 987 ntBASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 PHGDH-209ENST00000641074 1780 ntBASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATRIPQ8WXE1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 AC022211.2-201ENST00000585075 2527 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms