Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 KRT18P67-201ENST00000432816 1264 ntBASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 AP001005.1-201ENST00000571755 1248 ntBASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 MTDHP3-201ENST00000594186 672 ntBASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 AP001269.4-201ENST00000609611 512 ntBASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SH3RF2Q8TEC5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 RBM17P3-201ENST00000417687 1192 ntBASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 FGFR3P6-201ENST00000457012 610 ntBASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 AF186996.4-201ENST00000467186 377 ntBASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 RNA5SP419-201ENST00000515908 135 ntBASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 AC120114.3-201ENST00000611923 658 ntBASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 AC148477.8-201ENST00000624298 468 ntBASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.59■□□□□ 0.57
SH3RF2Q8TEC5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.58■□□□□ 0.57
SH3RF2Q8TEC5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SH3RF2Q8TEC5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SH3RF2Q8TEC5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SH3RF2Q8TEC5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SH3RF2Q8TEC5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.58■□□□□ 0.57
SH3RF2Q8TEC5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SH3RF2Q8TEC5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SH3RF2Q8TEC5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SH3RF2Q8TEC5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SH3RF2Q8TEC5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SH3RF2Q8TEC5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 AL590627.1-203ENST00000421194 1026 ntBASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms