Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 AL450487.1-201ENST00000426799 995 ntBASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 RN7SL606P-201ENST00000472779 293 ntBASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 AC074051.2-201ENST00000565115 352 ntBASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.31■□□□□ 0.52
GRIN3AQ8TCU5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 BICD1-207ENST00000551848 1962 ntBASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 AC104819.1-201ENST00000504587 486 ntBASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIN3AQ8TCU5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 VENTXP7-201ENST00000475503 772 ntBASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 AC091607.1-201ENST00000490318 1060 ntBASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 AC012615.1-201ENST00000565797 1299 ntBASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 Z69720.1-201ENST00000601483 472 ntBASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 AL121894.2-201ENST00000602977 491 ntBASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 AC138894.3-201ENST00000603787 634 ntBASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 AC106820.2-201ENST00000563775 3264 ntBASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIN3AQ8TCU5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GRIN3AQ8TCU5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GRIN3AQ8TCU5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.28■□□□□ 0.52
GRIN3AQ8TCU5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GRIN3AQ8TCU5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIN3AQ8TCU5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms