Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 AL645929.1-201ENST00000420084 975 ntBASIC15.74■□□□□ 0.11
CPEB3Q8NE35 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 AC005332.3-201ENST00000589904 676 ntBASIC15.74■□□□□ 0.11
CPEB3Q8NE35 AL121956.5-201ENST00000625261 221 ntBASIC15.74■□□□□ 0.11
CPEB3Q8NE35 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPEB3Q8NE35 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 AC011270.2-201ENST00000624293 2550 ntBASIC15.73■□□□□ 0.11
CPEB3Q8NE35 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 KRT18P35-201ENST00000510488 1269 ntBASIC15.73■□□□□ 0.11
CPEB3Q8NE35 FAM86EP-206ENST00000510506 987 ntBASIC15.73■□□□□ 0.11
CPEB3Q8NE35 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 GPR32P1-201ENST00000601788 811 ntBASIC15.73■□□□□ 0.11
CPEB3Q8NE35 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.73■□□□□ 0.11
CPEB3Q8NE35 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 AL353692.3-201ENST00000407031 1396 ntBASIC15.73■□□□□ 0.11
CPEB3Q8NE35 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPEB3Q8NE35 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 DUTP2-201ENST00000519164 463 ntBASIC15.72■□□□□ 0.11
CPEB3Q8NE35 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.72■□□□□ 0.11
CPEB3Q8NE35 AL445228.2-201ENST00000605589 952 ntBASIC15.72■□□□□ 0.11
CPEB3Q8NE35 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms