Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC27.98■■■□□ 2.07
VPS8Q8N3P4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
VPS8Q8N3P4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
VPS8Q8N3P4 MRPL3P1-201ENST00000400109 1033 ntBASIC27.97■■■□□ 2.07
VPS8Q8N3P4 AC026396.1-201ENST00000419388 421 ntBASIC27.97■■■□□ 2.07
VPS8Q8N3P4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC27.97■■■□□ 2.07
VPS8Q8N3P4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC27.97■■■□□ 2.07
VPS8Q8N3P4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC27.97■■■□□ 2.07
VPS8Q8N3P4 LINC01711-201ENST00000598340 967 ntBASIC27.97■■■□□ 2.07
VPS8Q8N3P4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC27.97■■■□□ 2.07
VPS8Q8N3P4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC27.97■■■□□ 2.07
VPS8Q8N3P4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
VPS8Q8N3P4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
VPS8Q8N3P4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC27.97■■■□□ 2.07
VPS8Q8N3P4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC27.97■■■□□ 2.07
VPS8Q8N3P4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 AC005104.2-201ENST00000427818 678 ntBASIC27.96■■■□□ 2.07
VPS8Q8N3P4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
VPS8Q8N3P4 BX276092.7-203ENST00000637198 1536 ntBASIC27.96■■■□□ 2.07
VPS8Q8N3P4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
VPS8Q8N3P4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
VPS8Q8N3P4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.07
VPS8Q8N3P4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC27.95■■■□□ 2.07
VPS8Q8N3P4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC27.95■■■□□ 2.07
VPS8Q8N3P4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC27.95■■■□□ 2.07
VPS8Q8N3P4 MIR7706-201ENST00000613747 67 ntBASIC27.95■■■□□ 2.07
VPS8Q8N3P4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC27.95■■■□□ 2.07
VPS8Q8N3P4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
VPS8Q8N3P4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC27.95■■■□□ 2.07
VPS8Q8N3P4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
VPS8Q8N3P4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.06
VPS8Q8N3P4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC27.95■■■□□ 2.06
VPS8Q8N3P4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
VPS8Q8N3P4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC27.95■■■□□ 2.06
VPS8Q8N3P4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
VPS8Q8N3P4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
VPS8Q8N3P4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
VPS8Q8N3P4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
VPS8Q8N3P4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 NEFHP1-201ENST00000412845 2629 ntBASIC27.94■■■□□ 2.06
VPS8Q8N3P4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 AC006116.8-202ENST00000587620 1550 ntBASIC27.94■■■□□ 2.06
VPS8Q8N3P4 AL049757.1-201ENST00000616842 1596 ntBASIC27.94■■■□□ 2.06
VPS8Q8N3P4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
VPS8Q8N3P4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 SART3-203ENST00000546611 1184 ntBASIC27.93■■■□□ 2.06
VPS8Q8N3P4 AC116407.2-201ENST00000613639 860 ntBASIC27.93■■■□□ 2.06
VPS8Q8N3P4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 AL139288.1-201ENST00000623748 933 ntBASIC27.93■■■□□ 2.06
VPS8Q8N3P4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
VPS8Q8N3P4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC27.93■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms