Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC170Q8IYT3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC170Q8IYT3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 AC026471.5-201ENST00000615068 467 ntBASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC170Q8IYT3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 AC106820.2-201ENST00000563775 3264 ntBASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 UBE2SP1-201ENST00000450587 669 ntBASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 FAM201B-201ENST00000458407 597 ntBASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC170Q8IYT3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 KRT18P29-201ENST00000397031 1267 ntBASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 LINC01451-201ENST00000623792 534 ntBASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 AC084018.2-201ENST00000613093 2607 ntBASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC170Q8IYT3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC170Q8IYT3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC170Q8IYT3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC170Q8IYT3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCDC170Q8IYT3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC170Q8IYT3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms