Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 AC124067.4-201ENST00000519691 2379 ntBASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 KRT18P55-202ENST00000578578 1546 ntBASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 AC004951.3-201ENST00000418645 1148 ntBASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 FITM1-202ENST00000559294 800 ntBASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 CKBP1-201ENST00000565489 1086 ntBASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CRLF3Q8IUI8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 FAM210CP-201ENST00000445714 574 ntBASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CRLF3Q8IUI8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CRLF3Q8IUI8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
CRLF3Q8IUI8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
CRLF3Q8IUI8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CRLF3Q8IUI8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms