Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 AC097488.1-201ENST00000507834 756 ntBASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRTM1Q86UE6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 AC009065.1-201ENST00000564055 1225 ntBASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 CD177P1-201ENST00000606252 935 ntBASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRTM1Q86UE6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms