Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SHFQ7M4L6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHFQ7M4L6 AC093010.1-201ENST00000473625 1624 ntBASIC16.27■□□□□ 0.2
SHFQ7M4L6 AL023806.1-201ENST00000603994 1649 ntBASIC16.27■□□□□ 0.2
SHFQ7M4L6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHFQ7M4L6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHFQ7M4L6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SHFQ7M4L6 PRORSD1P-201ENST00000295112 541 ntBASIC16.27■□□□□ 0.2
SHFQ7M4L6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SHFQ7M4L6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHFQ7M4L6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHFQ7M4L6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 AC233702.5-201ENST00000584107 538 ntBASIC16.27■□□□□ 0.2
SHFQ7M4L6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 KRT18P55-202ENST00000578578 1546 ntBASIC16.27■□□□□ 0.2
SHFQ7M4L6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SHFQ7M4L6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SHFQ7M4L6 KRT8P7-201ENST00000533003 1432 ntBASIC16.27■□□□□ 0.19
SHFQ7M4L6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHFQ7M4L6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHFQ7M4L6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.27■□□□□ 0.19
SHFQ7M4L6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHFQ7M4L6 LINC01126-201ENST00000623515 1646 ntBASIC16.27■□□□□ 0.19
SHFQ7M4L6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.26■□□□□ 0.19
SHFQ7M4L6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHFQ7M4L6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHFQ7M4L6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SHFQ7M4L6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHFQ7M4L6 AC036111.1-201ENST00000533973 1582 ntBASIC16.26■□□□□ 0.19
SHFQ7M4L6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHFQ7M4L6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.26■□□□□ 0.19
SHFQ7M4L6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SHFQ7M4L6 AP001094.4-201ENST00000579008 2176 ntBASIC16.26■□□□□ 0.19
SHFQ7M4L6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHFQ7M4L6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.26■□□□□ 0.19
SHFQ7M4L6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.26■□□□□ 0.19
SHFQ7M4L6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHFQ7M4L6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.26■□□□□ 0.19
SHFQ7M4L6 AC113410.3-201ENST00000623366 203 ntBASIC16.26■□□□□ 0.19
SHFQ7M4L6 AL049637.2-201ENST00000641778 930 ntBASIC16.26■□□□□ 0.19
SHFQ7M4L6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHFQ7M4L6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHFQ7M4L6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHFQ7M4L6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
SHFQ7M4L6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SHFQ7M4L6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.26■□□□□ 0.19
SHFQ7M4L6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHFQ7M4L6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SHFQ7M4L6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 MIR149-201ENST00000384879 89 ntBASIC16.25■□□□□ 0.19
SHFQ7M4L6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 AL158047.1-201ENST00000445918 881 ntBASIC16.25■□□□□ 0.19
SHFQ7M4L6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 AP005242.2-201ENST00000580065 1175 ntBASIC16.25■□□□□ 0.19
SHFQ7M4L6 MIR4674-201ENST00000582457 87 ntBASIC16.25■□□□□ 0.19
SHFQ7M4L6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 REXO1L10P-201ENST00000615707 1290 ntBASIC16.25■□□□□ 0.19
SHFQ7M4L6 REXO1L12P-201ENST00000622156 912 ntBASIC16.25■□□□□ 0.19
SHFQ7M4L6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms