Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.22■□□□□ 0.35
RNF44Q7L0R7 AC233702.3-201ENST00000578656 1387 ntBASIC17.22■□□□□ 0.35
RNF44Q7L0R7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF44Q7L0R7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 MTCL1P1-201ENST00000446207 792 ntBASIC17.21■□□□□ 0.35
RNF44Q7L0R7 VENTXP7-201ENST00000475503 772 ntBASIC17.21■□□□□ 0.35
RNF44Q7L0R7 KRT18P56-201ENST00000507275 550 ntBASIC17.21■□□□□ 0.35
RNF44Q7L0R7 AC011840.4-201ENST00000578471 627 ntBASIC17.21■□□□□ 0.35
RNF44Q7L0R7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF44Q7L0R7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF44Q7L0R7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF44Q7L0R7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
RNF44Q7L0R7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
RNF44Q7L0R7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
RNF44Q7L0R7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 BICD1-207ENST00000551848 1962 ntBASIC17.2■□□□□ 0.34
RNF44Q7L0R7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 Z69720.1-201ENST00000601483 472 ntBASIC17.2■□□□□ 0.34
RNF44Q7L0R7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF44Q7L0R7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms