Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.36■□□□□ 0.53
CASC4Q6P4E1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 AL512604.3-201ENST00000569583 964 ntBASIC18.36■□□□□ 0.53
CASC4Q6P4E1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 SEC1P-202ENST00000473944 940 ntBASIC18.35■□□□□ 0.53
CASC4Q6P4E1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASC4Q6P4E1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.34■□□□□ 0.53
CASC4Q6P4E1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CASC4Q6P4E1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CASC4Q6P4E1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASC4Q6P4E1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CASC4Q6P4E1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CASC4Q6P4E1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CASC4Q6P4E1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms