Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
KRT39Q6A163 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.41■□□□□ 0.7
KRT39Q6A163 FAM86EP-206ENST00000510506 987 ntBASIC19.41■□□□□ 0.7
KRT39Q6A163 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT39Q6A163 AC087388.1-201ENST00000571370 1112 ntBASIC19.41■□□□□ 0.7
KRT39Q6A163 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
KRT39Q6A163 AC011498.5-201ENST00000592027 486 ntBASIC19.41■□□□□ 0.7
KRT39Q6A163 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.41■□□□□ 0.7
KRT39Q6A163 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
KRT39Q6A163 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT39Q6A163 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
KRT39Q6A163 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
KRT39Q6A163 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 GNAS-203ENST00000306120 1878 ntBASIC19.4■□□□□ 0.7
KRT39Q6A163 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KRT39Q6A163 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 TSPY22P-201ENST00000427496 604 ntBASIC19.4■□□□□ 0.7
KRT39Q6A163 AC068472.1-201ENST00000474589 881 ntBASIC19.4■□□□□ 0.7
KRT39Q6A163 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT39Q6A163 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT39Q6A163 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT39Q6A163 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT39Q6A163 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT39Q6A163 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.4■□□□□ 0.7
KRT39Q6A163 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT39Q6A163 AC005332.1-201ENST00000577698 1310 ntBASIC19.4■□□□□ 0.7
KRT39Q6A163 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
KRT39Q6A163 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
KRT39Q6A163 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
KRT39Q6A163 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT39Q6A163 AC006116.8-202ENST00000587620 1550 ntBASIC19.4■□□□□ 0.7
KRT39Q6A163 AC090340.1-201ENST00000620778 4980 ntBASIC19.4■□□□□ 0.7
KRT39Q6A163 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT39Q6A163 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.39■□□□□ 0.7
KRT39Q6A163 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.39■□□□□ 0.7
KRT39Q6A163 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT39Q6A163 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.39■□□□□ 0.7
KRT39Q6A163 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
KRT39Q6A163 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT39Q6A163 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.39■□□□□ 0.7
KRT39Q6A163 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT39Q6A163 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
KRT39Q6A163 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
KRT39Q6A163 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT39Q6A163 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT39Q6A163 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT39Q6A163 AC112698.1-201ENST00000510299 916 ntBASIC19.39■□□□□ 0.69
KRT39Q6A163 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.39■□□□□ 0.69
KRT39Q6A163 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.39■□□□□ 0.69
KRT39Q6A163 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
KRT39Q6A163 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT39Q6A163 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT39Q6A163 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
KRT39Q6A163 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT39Q6A163 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT39Q6A163 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
KRT39Q6A163 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT39Q6A163 AC012317.2-201ENST00000623305 2251 ntBASIC19.39■□□□□ 0.69
KRT39Q6A163 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
KRT39Q6A163 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT39Q6A163 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms