Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 TSPY20P-201ENST00000450910 630 ntBASIC17.36■□□□□ 0.37
RNF220Q5VTB9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF220Q5VTB9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 CKBP1-201ENST00000565489 1086 ntBASIC17.35■□□□□ 0.37
RNF220Q5VTB9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 AC068587.9-201ENST00000641814 219 ntBASIC17.35■□□□□ 0.37
RNF220Q5VTB9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 KRT8P32-201ENST00000512863 1461 ntBASIC17.35■□□□□ 0.37
RNF220Q5VTB9 AL023806.1-201ENST00000603994 1649 ntBASIC17.35■□□□□ 0.37
RNF220Q5VTB9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF220Q5VTB9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 FAM207BP-201ENST00000447172 505 ntBASIC17.34■□□□□ 0.37
RNF220Q5VTB9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 B3GAT3P1-201ENST00000471720 806 ntBASIC17.34■□□□□ 0.37
RNF220Q5VTB9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 MIR6786-201ENST00000616843 113 ntBASIC17.34■□□□□ 0.37
RNF220Q5VTB9 AC130371.2-201ENST00000619443 611 ntBASIC17.34■□□□□ 0.37
RNF220Q5VTB9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF220Q5VTB9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF220Q5VTB9 PKD1P1-201ENST00000458669 6805 ntBASIC17.33■□□□□ 0.37
RNF220Q5VTB9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF220Q5VTB9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF220Q5VTB9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF220Q5VTB9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF220Q5VTB9 PRORSD1P-201ENST00000295112 541 ntBASIC17.33■□□□□ 0.36
RNF220Q5VTB9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF220Q5VTB9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF220Q5VTB9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms