Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCGF3Q3KNV8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCGF3Q3KNV8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCGF3Q3KNV8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 HEIH-201ENST00000623091 1652 ntBASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 AC092647.4-201ENST00000457211 535 ntBASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 YBX1P2-201ENST00000489612 999 ntBASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 AC139887.4-201ENST00000607877 719 ntBASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 AL109659.2-201ENST00000606809 1674 ntBASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF3Q3KNV8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 AC117947.1-201ENST00000427448 529 ntBASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 AC009947.2-201ENST00000444014 672 ntBASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 HOMER2P1-201ENST00000455653 964 ntBASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF3Q3KNV8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 TSPY5P-201ENST00000426936 936 ntBASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 AC063952.2-201ENST00000498792 1227 ntBASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.93■□□□□ 0.14
PCGF3Q3KNV8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms