Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IRX3P78415 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.88■□□□□ 0.93
IRX3P78415 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.87■□□□□ 0.93
IRX3P78415 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.87■□□□□ 0.93
IRX3P78415 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.87■□□□□ 0.93
IRX3P78415 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
IRX3P78415 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.87■□□□□ 0.93
IRX3P78415 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
IRX3P78415 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.87■□□□□ 0.93
IRX3P78415 RPS2P1-201ENST00000434010 821 ntBASIC20.87■□□□□ 0.93
IRX3P78415 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.87■□□□□ 0.93
IRX3P78415 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.87■□□□□ 0.93
IRX3P78415 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.87■□□□□ 0.93
IRX3P78415 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
IRX3P78415 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
IRX3P78415 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.87■□□□□ 0.93
IRX3P78415 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.87■□□□□ 0.93
IRX3P78415 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
IRX3P78415 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
IRX3P78415 AC098818.2-201ENST00000564925 2320 ntBASIC20.87■□□□□ 0.93
IRX3P78415 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IRX3P78415 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.87■□□□□ 0.93
IRX3P78415 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.86■□□□□ 0.93
IRX3P78415 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IRX3P78415 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
IRX3P78415 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
IRX3P78415 AL499627.1-201ENST00000569373 2188 ntBASIC20.86■□□□□ 0.93
IRX3P78415 HLA-J-201ENST00000462773 1622 ntBASIC20.86■□□□□ 0.93
IRX3P78415 LINC01126-201ENST00000623515 1646 ntBASIC20.86■□□□□ 0.93
IRX3P78415 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.86■□□□□ 0.93
IRX3P78415 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX3P78415 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.86■□□□□ 0.93
IRX3P78415 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.86■□□□□ 0.93
IRX3P78415 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.86■□□□□ 0.93
IRX3P78415 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.86■□□□□ 0.93
IRX3P78415 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IRX3P78415 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX3P78415 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX3P78415 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX3P78415 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
IRX3P78415 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.86■□□□□ 0.93
IRX3P78415 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX3P78415 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX3P78415 AC104581.1-202ENST00000635932 2618 ntBASIC20.86■□□□□ 0.93
IRX3P78415 AC104109.2-201ENST00000602919 1418 ntBASIC20.86■□□□□ 0.93
IRX3P78415 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IRX3P78415 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX3P78415 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
IRX3P78415 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IRX3P78415 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX3P78415 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX3P78415 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX3P78415 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.85■□□□□ 0.93
IRX3P78415 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.85■□□□□ 0.93
IRX3P78415 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.85■□□□□ 0.93
IRX3P78415 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IRX3P78415 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.85■□□□□ 0.93
IRX3P78415 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IRX3P78415 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.85■□□□□ 0.93
IRX3P78415 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IRX3P78415 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.85■□□□□ 0.93
IRX3P78415 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IRX3P78415 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
IRX3P78415 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
IRX3P78415 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IRX3P78415 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX3P78415 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IRX3P78415 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.85■□□□□ 0.93
IRX3P78415 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.85■□□□□ 0.93
IRX3P78415 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IRX3P78415 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
IRX3P78415 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
IRX3P78415 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IRX3P78415 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IRX3P78415 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IRX3P78415 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IRX3P78415 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.84■□□□□ 0.93
IRX3P78415 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IRX3P78415 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.84■□□□□ 0.93
IRX3P78415 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
IRX3P78415 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IRX3P78415 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IRX3P78415 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.84■□□□□ 0.93
IRX3P78415 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.84■□□□□ 0.93
IRX3P78415 OR7E14P-202ENST00000530490 1290 ntBASIC20.84■□□□□ 0.93
IRX3P78415 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms