Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NR1H2P55055 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NR1H2P55055 YBX1P10-201ENST00000444752 975 ntBASIC17.07■□□□□ 0.32
NR1H2P55055 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.07■□□□□ 0.32
NR1H2P55055 CR392000.1-201ENST00000624770 1228 ntBASIC17.07■□□□□ 0.32
NR1H2P55055 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NR1H2P55055 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
NR1H2P55055 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NR1H2P55055 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NR1H2P55055 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 AL499627.1-201ENST00000569373 2188 ntBASIC17.06■□□□□ 0.32
NR1H2P55055 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.06■□□□□ 0.32
NR1H2P55055 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.06■□□□□ 0.32
NR1H2P55055 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.06■□□□□ 0.32
NR1H2P55055 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.06■□□□□ 0.32
NR1H2P55055 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NR1H2P55055 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.06■□□□□ 0.32
NR1H2P55055 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NR1H2P55055 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.06■□□□□ 0.32
NR1H2P55055 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.06■□□□□ 0.32
NR1H2P55055 AC012306.2-201ENST00000609350 630 ntBASIC17.06■□□□□ 0.32
NR1H2P55055 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.06■□□□□ 0.32
NR1H2P55055 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NR1H2P55055 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NR1H2P55055 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
NR1H2P55055 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NR1H2P55055 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.06■□□□□ 0.32
NR1H2P55055 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.06■□□□□ 0.32
NR1H2P55055 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.06■□□□□ 0.32
NR1H2P55055 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NR1H2P55055 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H2P55055 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NR1H2P55055 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NR1H2P55055 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
NR1H2P55055 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NR1H2P55055 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 RBM17P1-201ENST00000453646 1190 ntBASIC17.05■□□□□ 0.32
NR1H2P55055 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
NR1H2P55055 C1QL1P1-201ENST00000568105 661 ntBASIC17.05■□□□□ 0.32
NR1H2P55055 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.05■□□□□ 0.32
NR1H2P55055 REXO1L10P-201ENST00000615707 1290 ntBASIC17.05■□□□□ 0.32
NR1H2P55055 AL031985.4-201ENST00000642138 673 ntBASIC17.05■□□□□ 0.32
NR1H2P55055 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.05■□□□□ 0.32
NR1H2P55055 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H2P55055 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.04■□□□□ 0.32
NR1H2P55055 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NR1H2P55055 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
NR1H2P55055 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
NR1H2P55055 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NR1H2P55055 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.04■□□□□ 0.32
NR1H2P55055 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H2P55055 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms