Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.44■□□□□ 0.38
PDX1P52945 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.44■□□□□ 0.38
PDX1P52945 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 AC243591.1-201ENST00000452967 1364 ntBASIC17.44■□□□□ 0.38
PDX1P52945 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.44■□□□□ 0.38
PDX1P52945 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.44■□□□□ 0.38
PDX1P52945 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 AC132008.2-207ENST00000454517 770 ntBASIC17.44■□□□□ 0.38
PDX1P52945 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.44■□□□□ 0.38
PDX1P52945 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.44■□□□□ 0.38
PDX1P52945 AC008608.2-201ENST00000606089 416 ntBASIC17.44■□□□□ 0.38
PDX1P52945 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.44■□□□□ 0.38
PDX1P52945 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.44■□□□□ 0.38
PDX1P52945 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.44■□□□□ 0.38
PDX1P52945 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDX1P52945 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.44■□□□□ 0.38
PDX1P52945 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.44■□□□□ 0.38
PDX1P52945 AC009102.3-201ENST00000623118 1491 ntBASIC17.44■□□□□ 0.38
PDX1P52945 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PDX1P52945 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.43■□□□□ 0.38
PDX1P52945 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.43■□□□□ 0.38
PDX1P52945 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.43■□□□□ 0.38
PDX1P52945 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.43■□□□□ 0.38
PDX1P52945 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.43■□□□□ 0.38
PDX1P52945 AL049840.3-201ENST00000602669 611 ntBASIC17.43■□□□□ 0.38
PDX1P52945 AC090164.3-201ENST00000610780 2143 ntBASIC17.43■□□□□ 0.38
PDX1P52945 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.43■□□□□ 0.38
PDX1P52945 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.43■□□□□ 0.38
PDX1P52945 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.43■□□□□ 0.38
PDX1P52945 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.43■□□□□ 0.38
PDX1P52945 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.43■□□□□ 0.38
PDX1P52945 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PDX1P52945 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.43■□□□□ 0.38
PDX1P52945 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDX1P52945 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.43■□□□□ 0.38
PDX1P52945 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.42■□□□□ 0.38
PDX1P52945 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PDX1P52945 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PDX1P52945 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.42■□□□□ 0.38
PDX1P52945 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PDX1P52945 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.42■□□□□ 0.38
PDX1P52945 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.42■□□□□ 0.38
PDX1P52945 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PDX1P52945 RCN1P2-201ENST00000398357 915 ntBASIC17.42■□□□□ 0.38
PDX1P52945 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.42■□□□□ 0.38
PDX1P52945 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PDX1P52945 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.42■□□□□ 0.38
PDX1P52945 AF186996.4-201ENST00000467186 377 ntBASIC17.42■□□□□ 0.38
PDX1P52945 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.42■□□□□ 0.38
PDX1P52945 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.42■□□□□ 0.38
PDX1P52945 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.42■□□□□ 0.38
PDX1P52945 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.42■□□□□ 0.38
PDX1P52945 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.42■□□□□ 0.38
PDX1P52945 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.42■□□□□ 0.38
PDX1P52945 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.42■□□□□ 0.38
PDX1P52945 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.42■□□□□ 0.38
PDX1P52945 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDX1P52945 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms