Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN2P51788 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CLCN2P51788 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLCN2P51788 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN2P51788 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCN2P51788 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCN2P51788 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN2P51788 AC135776.1-201ENST00000319817 2481 ntBASIC17.43■□□□□ 0.38
CLCN2P51788 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN2P51788 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLCN2P51788 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCN2P51788 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN2P51788 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCN2P51788 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCN2P51788 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN2P51788 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN2P51788 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCN2P51788 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCN2P51788 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLCN2P51788 AL109659.2-201ENST00000606809 1674 ntBASIC17.42■□□□□ 0.38
CLCN2P51788 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCN2P51788 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCN2P51788 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCN2P51788 AC036111.1-201ENST00000533973 1582 ntBASIC17.42■□□□□ 0.38
CLCN2P51788 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 AC112777.1-201ENST00000540175 1423 ntBASIC17.42■□□□□ 0.38
CLCN2P51788 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLCN2P51788 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CLCN2P51788 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCN2P51788 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCN2P51788 TSPY5P-201ENST00000426936 936 ntBASIC17.42■□□□□ 0.38
CLCN2P51788 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCN2P51788 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.42■□□□□ 0.38
CLCN2P51788 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.42■□□□□ 0.38
CLCN2P51788 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCN2P51788 AL023973.1-201ENST00000624619 620 ntBASIC17.42■□□□□ 0.38
CLCN2P51788 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCN2P51788 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCN2P51788 LINC01126-201ENST00000623515 1646 ntBASIC17.42■□□□□ 0.38
CLCN2P51788 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLCN2P51788 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 AL357033.4-201ENST00000617703 1807 ntBASIC17.42■□□□□ 0.38
CLCN2P51788 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLCN2P51788 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCN2P51788 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN2P51788 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLCN2P51788 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
CLCN2P51788 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLCN2P51788 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCN2P51788 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCN2P51788 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCN2P51788 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCN2P51788 AL023806.1-201ENST00000603994 1649 ntBASIC17.41■□□□□ 0.38
CLCN2P51788 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN2P51788 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.41■□□□□ 0.38
CLCN2P51788 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCN2P51788 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCN2P51788 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN2P51788 AC092647.4-201ENST00000457211 535 ntBASIC17.41■□□□□ 0.38
CLCN2P51788 AC011558.1-201ENST00000623459 338 ntBASIC17.41■□□□□ 0.38
CLCN2P51788 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN2P51788 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLCN2P51788 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN2P51788 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN2P51788 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN2P51788 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN2P51788 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN2P51788 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCN2P51788 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCN2P51788 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCN2P51788 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLCN2P51788 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCN2P51788 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN2P51788 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN2P51788 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN2P51788 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLCN2P51788 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN2P51788 AC093677.2-201ENST00000600169 1863 ntBASIC17.4■□□□□ 0.38
CLCN2P51788 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN2P51788 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLCN2P51788 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN2P51788 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN2P51788 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCN2P51788 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms