Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF144AP50876 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF144AP50876 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RNF144AP50876 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF144AP50876 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF144AP50876 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RNF144AP50876 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF144AP50876 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF144AP50876 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF144AP50876 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RNF144AP50876 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RNF144AP50876 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF144AP50876 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 AK4P3-201ENST00000418260 669 ntBASIC16.73■□□□□ 0.27
RNF144AP50876 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RNF144AP50876 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RNF144AP50876 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RNF144AP50876 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF144AP50876 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RNF144AP50876 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF144AP50876 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RNF144AP50876 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF144AP50876 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF144AP50876 AC134043.2-201ENST00000624206 2238 ntBASIC16.72■□□□□ 0.27
RNF144AP50876 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF144AP50876 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF144AP50876 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RNF144AP50876 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF144AP50876 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.72■□□□□ 0.27
RNF144AP50876 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF144AP50876 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF144AP50876 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF144AP50876 AC009065.1-201ENST00000564055 1225 ntBASIC16.72■□□□□ 0.27
RNF144AP50876 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF144AP50876 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
RNF144AP50876 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF144AP50876 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF144AP50876 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RNF144AP50876 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF144AP50876 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RNF144AP50876 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
RNF144AP50876 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RNF144AP50876 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF144AP50876 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF144AP50876 LINC00602-201ENST00000629776 2065 ntBASIC16.71■□□□□ 0.27
RNF144AP50876 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RNF144AP50876 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF144AP50876 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RNF144AP50876 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.71■□□□□ 0.27
RNF144AP50876 TMPOP1-202ENST00000424642 1267 ntBASIC16.71■□□□□ 0.27
RNF144AP50876 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF144AP50876 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF144AP50876 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF144AP50876 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms