Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX2-1P43699 AL355802.2-201ENST00000402069 882 ntBASIC14.74□□□□□ -0.05
NKX2-1P43699 HLA-L-209ENST00000420110 1011 ntBASIC14.74□□□□□ -0.05
NKX2-1P43699 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX2-1P43699 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX2-1P43699 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
NKX2-1P43699 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.74□□□□□ -0.05
NKX2-1P43699 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX2-1P43699 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.74□□□□□ -0.05
NKX2-1P43699 AC098934.4-201ENST00000564127 592 ntBASIC14.74□□□□□ -0.05
NKX2-1P43699 CKBP1-201ENST00000565489 1086 ntBASIC14.74□□□□□ -0.05
NKX2-1P43699 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
NKX2-1P43699 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.74□□□□□ -0.05
NKX2-1P43699 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX2-1P43699 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX2-1P43699 SDHAP2-201ENST00000455183 2001 ntBASIC14.74□□□□□ -0.05
NKX2-1P43699 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX2-1P43699 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NKX2-1P43699 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX2-1P43699 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NKX2-1P43699 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX2-1P43699 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX2-1P43699 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX2-1P43699 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NKX2-1P43699 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.73□□□□□ -0.05
NKX2-1P43699 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NKX2-1P43699 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NKX2-1P43699 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
NKX2-1P43699 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NKX2-1P43699 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.73□□□□□ -0.05
NKX2-1P43699 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 CROCCP2-202ENST00000412962 2773 ntBASIC14.73□□□□□ -0.05
NKX2-1P43699 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 ID1-201ENST00000376105 1233 ntBASIC14.73□□□□□ -0.05
NKX2-1P43699 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.73□□□□□ -0.05
NKX2-1P43699 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX2-1P43699 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.73□□□□□ -0.05
NKX2-1P43699 KRT16P5-201ENST00000455284 522 ntBASIC14.73□□□□□ -0.05
NKX2-1P43699 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX2-1P43699 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.73□□□□□ -0.05
NKX2-1P43699 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.73□□□□□ -0.05
NKX2-1P43699 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX2-1P43699 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX2-1P43699 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
NKX2-1P43699 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.73□□□□□ -0.05
NKX2-1P43699 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 AC133963.1-201ENST00000504166 1679 ntBASIC14.73□□□□□ -0.05
NKX2-1P43699 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.73□□□□□ -0.05
NKX2-1P43699 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX2-1P43699 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NKX2-1P43699 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NKX2-1P43699 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX2-1P43699 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.73□□□□□ -0.05
NKX2-1P43699 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX2-1P43699 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-1P43699 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-1P43699 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-1P43699 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-1P43699 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-1P43699 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-1P43699 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-1P43699 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-1P43699 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.72□□□□□ -0.05
NKX2-1P43699 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-1P43699 MIR149-201ENST00000384879 89 ntBASIC14.72□□□□□ -0.05
NKX2-1P43699 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-1P43699 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-1P43699 MCCD1P1-208ENST00000445732 328 ntBASIC14.72□□□□□ -0.05
NKX2-1P43699 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.72□□□□□ -0.05
NKX2-1P43699 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.72□□□□□ -0.05
NKX2-1P43699 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-1P43699 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.72□□□□□ -0.05
NKX2-1P43699 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-1P43699 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-1P43699 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms