Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.13■□□□□ 0.65
SSR1P43307 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 HMGA1P5-201ENST00000412453 271 ntBASIC19.13■□□□□ 0.65
SSR1P43307 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.13■□□□□ 0.65
SSR1P43307 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.13■□□□□ 0.65
SSR1P43307 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.13■□□□□ 0.65
SSR1P43307 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.13■□□□□ 0.65
SSR1P43307 AC066615.1-201ENST00000640911 628 ntBASIC19.13■□□□□ 0.65
SSR1P43307 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.13■□□□□ 0.65
SSR1P43307 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 AC134043.2-201ENST00000624206 2238 ntBASIC19.13■□□□□ 0.65
SSR1P43307 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SSR1P43307 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR1P43307 AL513477.1-201ENST00000602865 2407 ntBASIC19.12■□□□□ 0.65
SSR1P43307 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR1P43307 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SSR1P43307 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR1P43307 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR1P43307 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSR1P43307 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SSR1P43307 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSR1P43307 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR1P43307 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.12■□□□□ 0.65
SSR1P43307 LINC01126-201ENST00000623515 1646 ntBASIC19.12■□□□□ 0.65
SSR1P43307 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.12■□□□□ 0.65
SSR1P43307 FLJ13224-201ENST00000313737 1514 ntBASIC19.12■□□□□ 0.65
SSR1P43307 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR1P43307 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR1P43307 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSR1P43307 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SSR1P43307 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.12■□□□□ 0.65
SSR1P43307 AL512604.3-201ENST00000569583 964 ntBASIC19.12■□□□□ 0.65
SSR1P43307 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.12■□□□□ 0.65
SSR1P43307 FAM87A-204ENST00000613235 858 ntBASIC19.12■□□□□ 0.65
SSR1P43307 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.12■□□□□ 0.65
SSR1P43307 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.12■□□□□ 0.65
SSR1P43307 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR1P43307 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSR1P43307 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SSR1P43307 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
SSR1P43307 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.11■□□□□ 0.65
SSR1P43307 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SSR1P43307 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SSR1P43307 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.11■□□□□ 0.65
SSR1P43307 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SSR1P43307 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SSR1P43307 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.11■□□□□ 0.65
SSR1P43307 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.11■□□□□ 0.65
SSR1P43307 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.11■□□□□ 0.65
SSR1P43307 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.11■□□□□ 0.65
SSR1P43307 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SSR1P43307 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SSR1P43307 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.11■□□□□ 0.65
SSR1P43307 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.11■□□□□ 0.65
SSR1P43307 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.11■□□□□ 0.65
SSR1P43307 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.11■□□□□ 0.65
SSR1P43307 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.11■□□□□ 0.65
SSR1P43307 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.11■□□□□ 0.65
SSR1P43307 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SSR1P43307 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms