Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.91■□□□□ 0.62
GRIK1P39086 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.91■□□□□ 0.62
GRIK1P39086 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 RCN1P2-201ENST00000398357 915 ntBASIC18.91■□□□□ 0.62
GRIK1P39086 AC026396.1-201ENST00000419388 421 ntBASIC18.91■□□□□ 0.62
GRIK1P39086 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.91■□□□□ 0.62
GRIK1P39086 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
GRIK1P39086 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.91■□□□□ 0.62
GRIK1P39086 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
GRIK1P39086 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.91■□□□□ 0.62
GRIK1P39086 AL138831.2-201ENST00000606564 490 ntBASIC18.91■□□□□ 0.62
GRIK1P39086 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
GRIK1P39086 AC114341.1-201ENST00000618070 349 ntBASIC18.91■□□□□ 0.62
GRIK1P39086 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
GRIK1P39086 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
GRIK1P39086 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.91■□□□□ 0.62
GRIK1P39086 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GRIK1P39086 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
GRIK1P39086 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.9■□□□□ 0.62
GRIK1P39086 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GRIK1P39086 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GRIK1P39086 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
GRIK1P39086 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.9■□□□□ 0.62
GRIK1P39086 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.9■□□□□ 0.62
GRIK1P39086 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GRIK1P39086 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.9■□□□□ 0.62
GRIK1P39086 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.9■□□□□ 0.62
GRIK1P39086 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.9■□□□□ 0.62
GRIK1P39086 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.9■□□□□ 0.62
GRIK1P39086 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.9■□□□□ 0.62
GRIK1P39086 FAAHP1-202ENST00000446499 1238 ntBASIC18.9■□□□□ 0.62
GRIK1P39086 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.9■□□□□ 0.62
GRIK1P39086 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.9■□□□□ 0.62
GRIK1P39086 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.9■□□□□ 0.62
GRIK1P39086 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.9■□□□□ 0.62
GRIK1P39086 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.9■□□□□ 0.62
GRIK1P39086 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
GRIK1P39086 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.9■□□□□ 0.62
GRIK1P39086 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
GRIK1P39086 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 AC009113.1-201ENST00000570267 2443 ntBASIC18.9■□□□□ 0.62
GRIK1P39086 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GRIK1P39086 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
GRIK1P39086 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
GRIK1P39086 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
GRIK1P39086 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
GRIK1P39086 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.89■□□□□ 0.61
GRIK1P39086 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
GRIK1P39086 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
GRIK1P39086 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 DUTP2-201ENST00000519164 463 ntBASIC18.89■□□□□ 0.61
GRIK1P39086 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.89■□□□□ 0.61
GRIK1P39086 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
GRIK1P39086 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.89■□□□□ 0.61
GRIK1P39086 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.89■□□□□ 0.61
GRIK1P39086 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 REXO1L9P-201ENST00000604264 2108 ntBASIC18.89■□□□□ 0.61
GRIK1P39086 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GRIK1P39086 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms