Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM23P36406 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM23P36406 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM23P36406 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM23P36406 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM23P36406 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM23P36406 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM23P36406 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM23P36406 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM23P36406 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM23P36406 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM23P36406 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM23P36406 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM23P36406 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM23P36406 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM23P36406 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM23P36406 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM23P36406 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM23P36406 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM23P36406 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM23P36406 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM23P36406 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM23P36406 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM23P36406 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM23P36406 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM23P36406 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRIM23P36406 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM23P36406 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 KRT8P10-201ENST00000450021 1447 ntBASIC17.65■□□□□ 0.42
TRIM23P36406 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 NEFHP1-201ENST00000412845 2629 ntBASIC17.65■□□□□ 0.42
TRIM23P36406 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 AC007967.3-201ENST00000434308 558 ntBASIC17.65■□□□□ 0.42
TRIM23P36406 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM23P36406 AC106795.1-205ENST00000512851 1056 ntBASIC17.65■□□□□ 0.42
TRIM23P36406 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM23P36406 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM23P36406 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM23P36406 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM23P36406 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM23P36406 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM23P36406 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM23P36406 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM23P36406 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM23P36406 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM23P36406 AC009113.1-201ENST00000570267 2443 ntBASIC17.64■□□□□ 0.42
TRIM23P36406 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM23P36406 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM23P36406 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.64■□□□□ 0.42
TRIM23P36406 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.64■□□□□ 0.42
TRIM23P36406 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.64■□□□□ 0.42
TRIM23P36406 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.64■□□□□ 0.42
TRIM23P36406 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.64■□□□□ 0.42
TRIM23P36406 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM23P36406 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM23P36406 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM23P36406 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM23P36406 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM23P36406 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 AP002469.2-201ENST00000531724 424 ntBASIC17.64■□□□□ 0.41
TRIM23P36406 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM23P36406 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM23P36406 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM23P36406 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.64■□□□□ 0.41
TRIM23P36406 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM23P36406 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM23P36406 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM23P36406 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRIM23P36406 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM23P36406 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM23P36406 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM23P36406 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM23P36406 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM23P36406 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM23P36406 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM23P36406 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM23P36406 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
TRIM23P36406 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM23P36406 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRIM23P36406 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms