Protein–RNA interactions for Protein: P36222

CHI3L1, Chitinase-3-like protein 1, humanhuman

Predicted RBP Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1P36222 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CHI3L1P36222 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHI3L1P36222 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHI3L1P36222 KRT18P55-202ENST00000578578 1546 ntBASIC17.05■□□□□ 0.32
CHI3L1P36222 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.05■□□□□ 0.32
CHI3L1P36222 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHI3L1P36222 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.05■□□□□ 0.32
CHI3L1P36222 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CHI3L1P36222 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHI3L1P36222 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHI3L1P36222 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CHI3L1P36222 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHI3L1P36222 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 KRT8P9-201ENST00000558927 1449 ntBASIC17.04■□□□□ 0.32
CHI3L1P36222 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.04■□□□□ 0.32
CHI3L1P36222 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 NFIC-211ENST00000641145 8399 ntBASIC17.04■□□□□ 0.32
CHI3L1P36222 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.04■□□□□ 0.32
CHI3L1P36222 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CHI3L1P36222 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.04■□□□□ 0.32
CHI3L1P36222 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CHI3L1P36222 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CHI3L1P36222 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.04■□□□□ 0.32
CHI3L1P36222 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.04■□□□□ 0.32
CHI3L1P36222 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.04■□□□□ 0.32
CHI3L1P36222 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHI3L1P36222 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.03■□□□□ 0.32
CHI3L1P36222 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.03■□□□□ 0.32
CHI3L1P36222 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.03■□□□□ 0.32
CHI3L1P36222 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.03■□□□□ 0.32
CHI3L1P36222 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHI3L1P36222 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 MMP23A-201ENST00000234610 1017 ntBASIC17.03■□□□□ 0.32
CHI3L1P36222 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CHI3L1P36222 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.03■□□□□ 0.32
CHI3L1P36222 TSPY15P-201ENST00000457163 923 ntBASIC17.03■□□□□ 0.32
CHI3L1P36222 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.03■□□□□ 0.32
CHI3L1P36222 SEC1P-202ENST00000473944 940 ntBASIC17.03■□□□□ 0.32
CHI3L1P36222 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.03■□□□□ 0.32
CHI3L1P36222 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CHI3L1P36222 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.03■□□□□ 0.32
CHI3L1P36222 AC010947.1-201ENST00000623454 693 ntBASIC17.03■□□□□ 0.32
CHI3L1P36222 AC092865.7-201ENST00000641832 219 ntBASIC17.03■□□□□ 0.32
CHI3L1P36222 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHI3L1P36222 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHI3L1P36222 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.03■□□□□ 0.32
CHI3L1P36222 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.03■□□□□ 0.32
CHI3L1P36222 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHI3L1P36222 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHI3L1P36222 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHI3L1P36222 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHI3L1P36222 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHI3L1P36222 AC020916.1-201ENST00000587762 1774 ntBASIC17.02■□□□□ 0.32
CHI3L1P36222 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.02■□□□□ 0.32
CHI3L1P36222 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHI3L1P36222 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHI3L1P36222 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHI3L1P36222 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CHI3L1P36222 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CHI3L1P36222 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHI3L1P36222 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHI3L1P36222 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHI3L1P36222 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHI3L1P36222 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHI3L1P36222 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.02■□□□□ 0.32
CHI3L1P36222 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms