Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HOXA6P31267 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA6P31267 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA6P31267 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.64■□□□□ 0.41
HOXA6P31267 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
HOXA6P31267 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA6P31267 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA6P31267 GGTLC5P-201ENST00000617623 998 ntBASIC17.64■□□□□ 0.41
HOXA6P31267 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA6P31267 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
HOXA6P31267 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA6P31267 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
HOXA6P31267 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA6P31267 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA6P31267 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA6P31267 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA6P31267 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA6P31267 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA6P31267 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA6P31267 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HOXA6P31267 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
HOXA6P31267 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA6P31267 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA6P31267 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA6P31267 AL035633.1-201ENST00000406139 838 ntBASIC17.63■□□□□ 0.41
HOXA6P31267 TSEN15P1-201ENST00000423257 515 ntBASIC17.63■□□□□ 0.41
HOXA6P31267 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA6P31267 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA6P31267 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXA6P31267 AL096865.1-201ENST00000606796 927 ntBASIC17.63■□□□□ 0.41
HOXA6P31267 AC106028.4-201ENST00000614509 607 ntBASIC17.63■□□□□ 0.41
HOXA6P31267 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA6P31267 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA6P31267 AC004877.2-201ENST00000623941 599 ntBASIC17.63■□□□□ 0.41
HOXA6P31267 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXA6P31267 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA6P31267 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HOXA6P31267 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HOXA6P31267 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA6P31267 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA6P31267 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA6P31267 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA6P31267 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA6P31267 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA6P31267 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA6P31267 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA6P31267 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA6P31267 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA6P31267 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXA6P31267 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA6P31267 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA6P31267 DDX43P3-201ENST00000441064 443 ntBASIC17.62■□□□□ 0.41
HOXA6P31267 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.62■□□□□ 0.41
HOXA6P31267 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 KRT19P2-202ENST00000557173 1012 ntBASIC17.62■□□□□ 0.41
HOXA6P31267 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA6P31267 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HOXA6P31267 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA6P31267 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HOXA6P31267 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA6P31267 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA6P31267 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA6P31267 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA6P31267 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA6P31267 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HOXA6P31267 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXA6P31267 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HOXA6P31267 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA6P31267 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
HOXA6P31267 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HOXA6P31267 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms