Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GMCL1P1-201ENST00000463439 1581 ntBASIC17.7■□□□□ 0.42
VARSP26640 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VARSP26640 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.7■□□□□ 0.42
VARSP26640 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.69■□□□□ 0.42
VARSP26640 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.69■□□□□ 0.42
VARSP26640 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.69■□□□□ 0.42
VARSP26640 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.69■□□□□ 0.42
VARSP26640 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.69■□□□□ 0.42
VARSP26640 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.69■□□□□ 0.42
VARSP26640 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.69■□□□□ 0.42
VARSP26640 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.69■□□□□ 0.42
VARSP26640 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.69■□□□□ 0.42
VARSP26640 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.69■□□□□ 0.42
VARSP26640 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.69■□□□□ 0.42
VARSP26640 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.69■□□□□ 0.42
VARSP26640 GCSHP2-201ENST00000560971 527 ntBASIC17.69■□□□□ 0.42
VARSP26640 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VARSP26640 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.69■□□□□ 0.42
VARSP26640 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.69■□□□□ 0.42
VARSP26640 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
VARSP26640 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VARSP26640 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.69■□□□□ 0.42
VARSP26640 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VARSP26640 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VARSP26640 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
VARSP26640 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VARSP26640 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VARSP26640 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VARSP26640 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VARSP26640 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
VARSP26640 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VARSP26640 AP000523.1-201ENST00000398242 1049 ntBASIC17.68■□□□□ 0.42
VARSP26640 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.68■□□□□ 0.42
VARSP26640 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
VARSP26640 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.68■□□□□ 0.42
VARSP26640 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VARSP26640 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VARSP26640 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.68■□□□□ 0.42
VARSP26640 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.68■□□□□ 0.42
VARSP26640 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
VARSP26640 AC140113.3-201ENST00000605663 199 ntBASIC17.68■□□□□ 0.42
VARSP26640 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.68■□□□□ 0.42
VARSP26640 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VARSP26640 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VARSP26640 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.68■□□□□ 0.42
VARSP26640 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VARSP26640 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
VARSP26640 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
VARSP26640 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARSP26640 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARSP26640 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARSP26640 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
VARSP26640 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.67■□□□□ 0.42
VARSP26640 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.67■□□□□ 0.42
VARSP26640 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
VARSP26640 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
VARSP26640 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARSP26640 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.67■□□□□ 0.42
VARSP26640 SLC25A6P5-201ENST00000435663 894 ntBASIC17.67■□□□□ 0.42
VARSP26640 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.67■□□□□ 0.42
VARSP26640 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.67■□□□□ 0.42
VARSP26640 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.67■□□□□ 0.42
VARSP26640 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.67■□□□□ 0.42
VARSP26640 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.67■□□□□ 0.42
VARSP26640 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.67■□□□□ 0.42
VARSP26640 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.67■□□□□ 0.42
VARSP26640 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
VARSP26640 MIR3917-201ENST00000580971 93 ntBASIC17.67■□□□□ 0.42
VARSP26640 REXO1L9P-201ENST00000604264 2108 ntBASIC17.67■□□□□ 0.42
VARSP26640 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARSP26640 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARSP26640 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARSP26640 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.67■□□□□ 0.42
VARSP26640 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VARSP26640 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VARSP26640 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VARSP26640 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VARSP26640 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VARSP26640 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARSP26640 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms