Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 CCR12P-201ENST00000446203 998 ntBASIC16.71■□□□□ 0.27
TNFRSF1BP20333 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TNFRSF1BP20333 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TNFRSF1BP20333 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TNFRSF1BP20333 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TNFRSF1BP20333 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.7■□□□□ 0.26
TNFRSF1BP20333 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 FITM1-202ENST00000559294 800 ntBASIC16.7■□□□□ 0.26
TNFRSF1BP20333 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF1BP20333 AP001094.4-201ENST00000579008 2176 ntBASIC16.7■□□□□ 0.26
TNFRSF1BP20333 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 AC009065.1-201ENST00000564055 1225 ntBASIC16.69■□□□□ 0.26
TNFRSF1BP20333 AC024243.1-201ENST00000609234 778 ntBASIC16.69■□□□□ 0.26
TNFRSF1BP20333 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 AC116562.4-202ENST00000641738 218 ntBASIC16.69■□□□□ 0.26
TNFRSF1BP20333 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TNFRSF1BP20333 AC084018.2-201ENST00000613093 2607 ntBASIC16.69■□□□□ 0.26
TNFRSF1BP20333 AL023806.1-201ENST00000603994 1649 ntBASIC16.69■□□□□ 0.26
TNFRSF1BP20333 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms