Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
NCLP19338 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
NCLP19338 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC21.42■■□□□ 1.02
NCLP19338 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.42■■□□□ 1.02
NCLP19338 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NCLP19338 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.42■■□□□ 1.02
NCLP19338 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NCLP19338 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 AC008556.1-201ENST00000610908 2040 ntBASIC21.41■■□□□ 1.02
NCLP19338 SIRPAP1-201ENST00000448467 1770 ntBASIC21.41■■□□□ 1.02
NCLP19338 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.41■■□□□ 1.02
NCLP19338 MYLKP1-201ENST00000509077 1580 ntBASIC21.41■■□□□ 1.02
NCLP19338 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NCLP19338 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.41■■□□□ 1.02
NCLP19338 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
NCLP19338 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
NCLP19338 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.41■■□□□ 1.02
NCLP19338 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.41■■□□□ 1.02
NCLP19338 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.41■■□□□ 1.02
NCLP19338 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.41■■□□□ 1.02
NCLP19338 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.41■■□□□ 1.02
NCLP19338 AC011298.2-201ENST00000617989 482 ntBASIC21.41■■□□□ 1.02
NCLP19338 AC099343.3-201ENST00000605834 2503 ntBASIC21.41■■□□□ 1.02
NCLP19338 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.41■■□□□ 1.02
NCLP19338 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NCLP19338 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
NCLP19338 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.4■■□□□ 1.02
NCLP19338 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.4■■□□□ 1.02
NCLP19338 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.4■■□□□ 1.02
NCLP19338 CR392000.1-201ENST00000624770 1228 ntBASIC21.4■■□□□ 1.02
NCLP19338 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.4■■□□□ 1.02
NCLP19338 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.4■■□□□ 1.02
NCLP19338 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.4■■□□□ 1.02
NCLP19338 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
NCLP19338 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
NCLP19338 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
NCLP19338 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NCLP19338 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
NCLP19338 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
NCLP19338 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NCLP19338 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NCLP19338 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC21.39■■□□□ 1.02
NCLP19338 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NCLP19338 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.39■■□□□ 1.01
NCLP19338 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC21.39■■□□□ 1.01
NCLP19338 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.39■■□□□ 1.01
NCLP19338 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.39■■□□□ 1.01
NCLP19338 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.39■■□□□ 1.01
NCLP19338 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.39■■□□□ 1.01
NCLP19338 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.39■■□□□ 1.01
NCLP19338 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
NCLP19338 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
NCLP19338 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NCLP19338 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NCLP19338 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCLP19338 KRT16P1-201ENST00000399124 1418 ntBASIC21.38■■□□□ 1.01
NCLP19338 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCLP19338 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NCLP19338 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCLP19338 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.38■■□□□ 1.01
NCLP19338 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
NCLP19338 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NCLP19338 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms