Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRAP18433 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRAP18433 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRAP18433 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PTPRAP18433 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPRAP18433 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PTPRAP18433 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.7■□□□□ 0.91
PTPRAP18433 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PTPRAP18433 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRAP18433 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PTPRAP18433 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
PTPRAP18433 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPRAP18433 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PTPRAP18433 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRAP18433 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.7■□□□□ 0.9
PTPRAP18433 DNAJB3-202ENST00000449667 1266 ntBASIC20.7■□□□□ 0.9
PTPRAP18433 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRAP18433 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPRAP18433 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRAP18433 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRAP18433 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.7■□□□□ 0.9
PTPRAP18433 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.7■□□□□ 0.9
PTPRAP18433 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PTPRAP18433 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.7■□□□□ 0.9
PTPRAP18433 AL355385.1-201ENST00000606123 409 ntBASIC20.7■□□□□ 0.9
PTPRAP18433 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRAP18433 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRAP18433 AL049757.1-201ENST00000616842 1596 ntBASIC20.7■□□□□ 0.9
PTPRAP18433 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRAP18433 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPRAP18433 AC022898.2-201ENST00000616822 1312 ntBASIC20.7■□□□□ 0.9
PTPRAP18433 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRAP18433 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRAP18433 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPRAP18433 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRAP18433 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPRAP18433 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PTPRAP18433 AC132938.5-201ENST00000624980 1813 ntBASIC20.69■□□□□ 0.9
PTPRAP18433 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPRAP18433 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPRAP18433 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRAP18433 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPRAP18433 AC006504.4-201ENST00000592118 1568 ntBASIC20.69■□□□□ 0.9
PTPRAP18433 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PTPRAP18433 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRAP18433 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRAP18433 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRAP18433 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.69■□□□□ 0.9
PTPRAP18433 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.69■□□□□ 0.9
PTPRAP18433 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPRAP18433 AC027796.2-201ENST00000575326 344 ntBASIC20.69■□□□□ 0.9
PTPRAP18433 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPRAP18433 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPRAP18433 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRAP18433 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PTPRAP18433 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRAP18433 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PTPRAP18433 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRAP18433 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
PTPRAP18433 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
PTPRAP18433 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRAP18433 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRAP18433 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRAP18433 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRAP18433 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRAP18433 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPRAP18433 AC148477.5-201ENST00000625164 1645 ntBASIC20.68■□□□□ 0.9
PTPRAP18433 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPRAP18433 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPRAP18433 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRAP18433 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPRAP18433 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRAP18433 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRAP18433 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PTPRAP18433 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPRAP18433 ELK2BP-201ENST00000415014 1224 ntBASIC20.68■□□□□ 0.9
PTPRAP18433 MCCD1P2-201ENST00000423228 335 ntBASIC20.68■□□□□ 0.9
PTPRAP18433 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPRAP18433 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPRAP18433 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PTPRAP18433 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPRAP18433 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.68■□□□□ 0.9
PTPRAP18433 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPRAP18433 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPRAP18433 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRAP18433 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRAP18433 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRAP18433 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PTPRAP18433 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRAP18433 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPRAP18433 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRAP18433 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRAP18433 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PTPRAP18433 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRAP18433 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRAP18433 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRAP18433 AC211486.1-202ENST00000416371 468 ntBASIC20.67■□□□□ 0.9
PTPRAP18433 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.67■□□□□ 0.9
PTPRAP18433 AC211476.1-201ENST00000503899 468 ntBASIC20.67■□□□□ 0.9
PTPRAP18433 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms