Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.09■□□□□ 0.49
SRFP11831 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFP11831 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.09■□□□□ 0.49
SRFP11831 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.09■□□□□ 0.49
SRFP11831 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SRFP11831 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFP11831 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.09■□□□□ 0.49
SRFP11831 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.09■□□□□ 0.49
SRFP11831 AC093028.1-201ENST00000622998 982 ntBASIC18.09■□□□□ 0.49
SRFP11831 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRFP11831 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFP11831 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SRFP11831 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.09■□□□□ 0.49
SRFP11831 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SRFP11831 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SRFP11831 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFP11831 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.09■□□□□ 0.49
SRFP11831 AC005082.1-201ENST00000413042 2259 ntBASIC18.09■□□□□ 0.49
SRFP11831 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRFP11831 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SRFP11831 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SRFP11831 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.08■□□□□ 0.49
SRFP11831 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.08■□□□□ 0.49
SRFP11831 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.08■□□□□ 0.49
SRFP11831 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SRFP11831 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.08■□□□□ 0.49
SRFP11831 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SRFP11831 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SRFP11831 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.08■□□□□ 0.49
SRFP11831 AC132938.5-201ENST00000624980 1813 ntBASIC18.08■□□□□ 0.48
SRFP11831 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFP11831 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SRFP11831 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFP11831 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SRFP11831 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFP11831 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.48
SRFP11831 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.08■□□□□ 0.48
SRFP11831 SIGLEC30P-201ENST00000455569 941 ntBASIC18.08■□□□□ 0.48
SRFP11831 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SRFP11831 AC096734.2-201ENST00000562054 433 ntBASIC18.08■□□□□ 0.48
SRFP11831 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
SRFP11831 AC004877.2-201ENST00000623941 599 ntBASIC18.08■□□□□ 0.48
SRFP11831 AL805961.1-202ENST00000641562 540 ntBASIC18.08■□□□□ 0.48
SRFP11831 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFP11831 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
SRFP11831 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFP11831 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.08■□□□□ 0.48
SRFP11831 AC148477.5-201ENST00000625164 1645 ntBASIC18.08■□□□□ 0.48
SRFP11831 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SRFP11831 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SRFP11831 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFP11831 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFP11831 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SRFP11831 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.07■□□□□ 0.48
SRFP11831 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SRFP11831 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFP11831 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.07■□□□□ 0.48
SRFP11831 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFP11831 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SRFP11831 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFP11831 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.07■□□□□ 0.48
SRFP11831 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.07■□□□□ 0.48
SRFP11831 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.07■□□□□ 0.48
SRFP11831 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.07■□□□□ 0.48
SRFP11831 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.07■□□□□ 0.48
SRFP11831 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.07■□□□□ 0.48
SRFP11831 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.07■□□□□ 0.48
SRFP11831 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.07■□□□□ 0.48
SRFP11831 AC010507.1-201ENST00000633895 436 ntBASIC18.07■□□□□ 0.48
SRFP11831 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SRFP11831 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.07■□□□□ 0.48
SRFP11831 SIRPAP1-201ENST00000448467 1770 ntBASIC18.07■□□□□ 0.48
SRFP11831 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SRFP11831 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SRFP11831 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SRFP11831 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFP11831 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRFP11831 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFP11831 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFP11831 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFP11831 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFP11831 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.06■□□□□ 0.48
SRFP11831 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFP11831 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRFP11831 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRFP11831 BCAR1-209ENST00000546196 1340 ntBASIC18.06■□□□□ 0.48
SRFP11831 AL049757.1-201ENST00000616842 1596 ntBASIC18.06■□□□□ 0.48
SRFP11831 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFP11831 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.06■□□□□ 0.48
SRFP11831 KLF4P1-201ENST00000412782 1185 ntBASIC18.06■□□□□ 0.48
SRFP11831 FAM58CP-201ENST00000435741 640 ntBASIC18.06■□□□□ 0.48
SRFP11831 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.06■□□□□ 0.48
SRFP11831 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SRFP11831 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.06■□□□□ 0.48
SRFP11831 KRT19P2-202ENST00000557173 1012 ntBASIC18.06■□□□□ 0.48
SRFP11831 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.06■□□□□ 0.48
SRFP11831 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SRFP11831 AC239800.4-201ENST00000603712 296 ntBASIC18.06■□□□□ 0.48
SRFP11831 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.06■□□□□ 0.48
SRFP11831 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms