Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
TOP1P11387 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.09■□□□□ 0.97
TOP1P11387 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TOP1P11387 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TOP1P11387 AC093677.2-201ENST00000600169 1863 ntBASIC21.09■□□□□ 0.97
TOP1P11387 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 NSUN5P1-202ENST00000421140 1535 ntBASIC21.09■□□□□ 0.97
TOP1P11387 NSUN5P2-203ENST00000457352 1529 ntBASIC21.09■□□□□ 0.97
TOP1P11387 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
TOP1P11387 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TOP1P11387 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TOP1P11387 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TOP1P11387 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.08■□□□□ 0.97
TOP1P11387 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.08■□□□□ 0.97
TOP1P11387 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.08■□□□□ 0.97
TOP1P11387 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TOP1P11387 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TOP1P11387 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TOP1P11387 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TOP1P11387 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TOP1P11387 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TOP1P11387 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TOP1P11387 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TOP1P11387 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TOP1P11387 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
TOP1P11387 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
TOP1P11387 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.08■□□□□ 0.97
TOP1P11387 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.08■□□□□ 0.97
TOP1P11387 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TOP1P11387 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.08■□□□□ 0.97
TOP1P11387 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
TOP1P11387 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
TOP1P11387 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TOP1P11387 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TOP1P11387 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TOP1P11387 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.08■□□□□ 0.96
TOP1P11387 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.08■□□□□ 0.96
TOP1P11387 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.08■□□□□ 0.96
TOP1P11387 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TOP1P11387 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TOP1P11387 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
TOP1P11387 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.08■□□□□ 0.96
TOP1P11387 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.07■□□□□ 0.96
TOP1P11387 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.07■□□□□ 0.96
TOP1P11387 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.07■□□□□ 0.96
TOP1P11387 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.07■□□□□ 0.96
TOP1P11387 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.07■□□□□ 0.96
TOP1P11387 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
TOP1P11387 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.07■□□□□ 0.96
TOP1P11387 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.07■□□□□ 0.96
TOP1P11387 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.07■□□□□ 0.96
TOP1P11387 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
TOP1P11387 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.07■□□□□ 0.96
TOP1P11387 AL133373.2-201ENST00000623187 2828 ntBASIC21.07■□□□□ 0.96
TOP1P11387 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.07■□□□□ 0.96
TOP1P11387 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TOP1P11387 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TOP1P11387 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.06■□□□□ 0.96
TOP1P11387 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TOP1P11387 TSPY19P-201ENST00000418461 509 ntBASIC21.06■□□□□ 0.96
TOP1P11387 TSPY18P-201ENST00000441642 509 ntBASIC21.06■□□□□ 0.96
TOP1P11387 FOSL1P1-201ENST00000511041 816 ntBASIC21.06■□□□□ 0.96
TOP1P11387 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.06■□□□□ 0.96
TOP1P11387 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.06■□□□□ 0.96
TOP1P11387 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.06■□□□□ 0.96
TOP1P11387 AC099336.1-202ENST00000602961 463 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms