Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND3P03897 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND3P03897 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND3P03897 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MT-ND3P03897 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.34■□□□□ 0.53
MT-ND3P03897 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MT-ND3P03897 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.34■□□□□ 0.53
MT-ND3P03897 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.34■□□□□ 0.53
MT-ND3P03897 HMGA1P5-201ENST00000412453 271 ntBASIC18.34■□□□□ 0.53
MT-ND3P03897 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.34■□□□□ 0.53
MT-ND3P03897 MCCD1P1-208ENST00000445732 328 ntBASIC18.34■□□□□ 0.53
MT-ND3P03897 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.34■□□□□ 0.53
MT-ND3P03897 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MT-ND3P03897 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MT-ND3P03897 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND3P03897 AC009053.2-201ENST00000563701 2365 ntBASIC18.34■□□□□ 0.53
MT-ND3P03897 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND3P03897 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.34■□□□□ 0.53
MT-ND3P03897 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MT-ND3P03897 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
MT-ND3P03897 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND3P03897 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.33■□□□□ 0.53
MT-ND3P03897 AC099343.3-201ENST00000605834 2503 ntBASIC18.33■□□□□ 0.53
MT-ND3P03897 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND3P03897 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND3P03897 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND3P03897 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.33■□□□□ 0.53
MT-ND3P03897 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND3P03897 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.33■□□□□ 0.53
MT-ND3P03897 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND3P03897 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MT-ND3P03897 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.33■□□□□ 0.52
MT-ND3P03897 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.33■□□□□ 0.52
MT-ND3P03897 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.33■□□□□ 0.52
MT-ND3P03897 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.33■□□□□ 0.52
MT-ND3P03897 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.33■□□□□ 0.52
MT-ND3P03897 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
MT-ND3P03897 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.33■□□□□ 0.52
MT-ND3P03897 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.33■□□□□ 0.52
MT-ND3P03897 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
MT-ND3P03897 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.33■□□□□ 0.52
MT-ND3P03897 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.33■□□□□ 0.52
MT-ND3P03897 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.33■□□□□ 0.52
MT-ND3P03897 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.33■□□□□ 0.52
MT-ND3P03897 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MT-ND3P03897 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.33■□□□□ 0.52
MT-ND3P03897 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MT-ND3P03897 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.32■□□□□ 0.52
MT-ND3P03897 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MT-ND3P03897 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 BX664615.1-201ENST00000443558 458 ntBASIC18.32■□□□□ 0.52
MT-ND3P03897 DUX4L26-201ENST00000489078 1255 ntBASIC18.32■□□□□ 0.52
MT-ND3P03897 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.32■□□□□ 0.52
MT-ND3P03897 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.32■□□□□ 0.52
MT-ND3P03897 AC010203.1-204ENST00000548782 407 ntBASIC18.32■□□□□ 0.52
MT-ND3P03897 LINC01238-205ENST00000567549 1107 ntBASIC18.32■□□□□ 0.52
MT-ND3P03897 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.32■□□□□ 0.52
MT-ND3P03897 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.32■□□□□ 0.52
MT-ND3P03897 AC010653.2-201ENST00000623505 997 ntBASIC18.32■□□□□ 0.52
MT-ND3P03897 AC108860.2-201ENST00000562760 2183 ntBASIC18.32■□□□□ 0.52
MT-ND3P03897 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.32■□□□□ 0.52
MT-ND3P03897 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
MT-ND3P03897 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.32■□□□□ 0.52
MT-ND3P03897 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.32■□□□□ 0.52
MT-ND3P03897 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MT-ND3P03897 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.31■□□□□ 0.52
MT-ND3P03897 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MT-ND3P03897 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MT-ND3P03897 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MT-ND3P03897 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms