Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA1P02708 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CHRNA1P02708 SIGLEC16-201ENST00000599858 1437 ntBASIC19.46■□□□□ 0.71
CHRNA1P02708 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA1P02708 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
CHRNA1P02708 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA1P02708 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA1P02708 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA1P02708 SPDYE21P-201ENST00000413323 827 ntBASIC19.46■□□□□ 0.71
CHRNA1P02708 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA1P02708 AC009947.1-201ENST00000444350 727 ntBASIC19.46■□□□□ 0.71
CHRNA1P02708 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
CHRNA1P02708 AL139424.1-201ENST00000607572 797 ntBASIC19.46■□□□□ 0.71
CHRNA1P02708 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CHRNA1P02708 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.46■□□□□ 0.71
CHRNA1P02708 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.46■□□□□ 0.71
CHRNA1P02708 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA1P02708 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA1P02708 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CHRNA1P02708 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CHRNA1P02708 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA1P02708 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA1P02708 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.46■□□□□ 0.71
CHRNA1P02708 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA1P02708 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.45■□□□□ 0.7
CHRNA1P02708 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA1P02708 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CHRNA1P02708 AC073621.1-201ENST00000392730 636 ntBASIC19.45■□□□□ 0.7
CHRNA1P02708 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA1P02708 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.45■□□□□ 0.7
CHRNA1P02708 AC103564.2-201ENST00000432853 1299 ntBASIC19.45■□□□□ 0.7
CHRNA1P02708 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.45■□□□□ 0.7
CHRNA1P02708 AC092183.1-201ENST00000469884 875 ntBASIC19.45■□□□□ 0.7
CHRNA1P02708 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.45■□□□□ 0.7
CHRNA1P02708 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.45■□□□□ 0.7
CHRNA1P02708 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.45■□□□□ 0.7
CHRNA1P02708 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.45■□□□□ 0.7
CHRNA1P02708 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA1P02708 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CHRNA1P02708 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CHRNA1P02708 AC022898.2-201ENST00000616822 1312 ntBASIC19.45■□□□□ 0.7
CHRNA1P02708 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA1P02708 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.45■□□□□ 0.7
CHRNA1P02708 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA1P02708 SIRPAP1-201ENST00000448467 1770 ntBASIC19.44■□□□□ 0.7
CHRNA1P02708 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHRNA1P02708 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNA1P02708 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNA1P02708 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNA1P02708 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.44■□□□□ 0.7
CHRNA1P02708 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
CHRNA1P02708 AC073592.5-201ENST00000624854 528 ntBASIC19.44■□□□□ 0.7
CHRNA1P02708 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.44■□□□□ 0.7
CHRNA1P02708 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CHRNA1P02708 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CHRNA1P02708 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA1P02708 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.44■□□□□ 0.7
CHRNA1P02708 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNA1P02708 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA1P02708 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA1P02708 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNA1P02708 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA1P02708 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CHRNA1P02708 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA1P02708 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHRNA1P02708 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNA1P02708 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA1P02708 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA1P02708 AC007967.2-201ENST00000432613 625 ntBASIC19.43■□□□□ 0.7
CHRNA1P02708 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.43■□□□□ 0.7
CHRNA1P02708 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.43■□□□□ 0.7
CHRNA1P02708 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.43■□□□□ 0.7
CHRNA1P02708 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.43■□□□□ 0.7
CHRNA1P02708 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.43■□□□□ 0.7
CHRNA1P02708 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.43■□□□□ 0.7
CHRNA1P02708 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.43■□□□□ 0.7
CHRNA1P02708 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNA1P02708 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNA1P02708 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms