Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
OPHN1O60890 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
OPHN1O60890 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
OPHN1O60890 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
OPHN1O60890 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
OPHN1O60890 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
OPHN1O60890 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.77■□□□□ 0.6
OPHN1O60890 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.77■□□□□ 0.6
OPHN1O60890 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.77■□□□□ 0.6
OPHN1O60890 AC112497.1-201ENST00000624824 639 ntBASIC18.77■□□□□ 0.6
OPHN1O60890 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.77■□□□□ 0.6
OPHN1O60890 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
OPHN1O60890 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
OPHN1O60890 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
OPHN1O60890 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
OPHN1O60890 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
OPHN1O60890 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
OPHN1O60890 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
OPHN1O60890 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
OPHN1O60890 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.76■□□□□ 0.59
OPHN1O60890 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.76■□□□□ 0.59
OPHN1O60890 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.76■□□□□ 0.59
OPHN1O60890 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
OPHN1O60890 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.76■□□□□ 0.59
OPHN1O60890 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
OPHN1O60890 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
OPHN1O60890 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
OPHN1O60890 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.76■□□□□ 0.59
OPHN1O60890 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.76■□□□□ 0.59
OPHN1O60890 AC004870.1-201ENST00000315132 882 ntBASIC18.76■□□□□ 0.59
OPHN1O60890 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
OPHN1O60890 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.76■□□□□ 0.59
OPHN1O60890 AC246785.2-201ENST00000432512 513 ntBASIC18.76■□□□□ 0.59
OPHN1O60890 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.76■□□□□ 0.59
OPHN1O60890 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.76■□□□□ 0.59
OPHN1O60890 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 AC104390.1-201ENST00000555663 520 ntBASIC18.76■□□□□ 0.59
OPHN1O60890 AC111152.3-201ENST00000569699 673 ntBASIC18.76■□□□□ 0.59
OPHN1O60890 RN7SL510P-201ENST00000581311 263 ntBASIC18.76■□□□□ 0.59
OPHN1O60890 AC092329.2-201ENST00000598402 547 ntBASIC18.76■□□□□ 0.59
OPHN1O60890 NPAP1P7-201ENST00000613027 823 ntBASIC18.76■□□□□ 0.59
OPHN1O60890 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
OPHN1O60890 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.76■□□□□ 0.59
OPHN1O60890 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
OPHN1O60890 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
OPHN1O60890 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OPHN1O60890 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
OPHN1O60890 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OPHN1O60890 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.75■□□□□ 0.59
OPHN1O60890 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.75■□□□□ 0.59
OPHN1O60890 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OPHN1O60890 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
OPHN1O60890 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OPHN1O60890 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OPHN1O60890 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OPHN1O60890 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
OPHN1O60890 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
OPHN1O60890 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.75■□□□□ 0.59
OPHN1O60890 SPDYE15P-201ENST00000424157 909 ntBASIC18.75■□□□□ 0.59
OPHN1O60890 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.75■□□□□ 0.59
OPHN1O60890 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.75■□□□□ 0.59
OPHN1O60890 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.75■□□□□ 0.59
OPHN1O60890 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.75■□□□□ 0.59
OPHN1O60890 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.75■□□□□ 0.59
OPHN1O60890 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.75■□□□□ 0.59
OPHN1O60890 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.75■□□□□ 0.59
OPHN1O60890 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
OPHN1O60890 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
OPHN1O60890 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
OPHN1O60890 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
OPHN1O60890 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms