Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA12O60330 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA12O60330 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA12O60330 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.81■□□□□ 0.44
PCDHGA12O60330 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA12O60330 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.81■□□□□ 0.44
PCDHGA12O60330 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA12O60330 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA12O60330 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGA12O60330 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA12O60330 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 AL133373.2-201ENST00000623187 2828 ntBASIC17.8■□□□□ 0.44
PCDHGA12O60330 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA12O60330 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA12O60330 AC243591.1-201ENST00000452967 1364 ntBASIC17.79■□□□□ 0.44
PCDHGA12O60330 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 MIR149-201ENST00000384879 89 ntBASIC17.79■□□□□ 0.44
PCDHGA12O60330 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 SCARNA2-201ENST00000458748 420 ntBASIC17.79■□□□□ 0.44
PCDHGA12O60330 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 AC073648.2-201ENST00000510116 352 ntBASIC17.79■□□□□ 0.44
PCDHGA12O60330 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 AC139887.3-201ENST00000568585 713 ntBASIC17.79■□□□□ 0.44
PCDHGA12O60330 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA12O60330 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA12O60330 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms