Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ATP9BO43861 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP9BO43861 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP9BO43861 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP9BO43861 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP9BO43861 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
ATP9BO43861 AC005332.3-201ENST00000589904 676 ntBASIC18.62■□□□□ 0.57
ATP9BO43861 AL390719.2-201ENST00000606993 987 ntBASIC18.62■□□□□ 0.57
ATP9BO43861 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP9BO43861 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.62■□□□□ 0.57
ATP9BO43861 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ATP9BO43861 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP9BO43861 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.62■□□□□ 0.57
ATP9BO43861 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ATP9BO43861 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.62■□□□□ 0.57
ATP9BO43861 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP9BO43861 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.62■□□□□ 0.57
ATP9BO43861 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
ATP9BO43861 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.62■□□□□ 0.57
ATP9BO43861 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP9BO43861 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATP9BO43861 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP9BO43861 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATP9BO43861 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP9BO43861 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP9BO43861 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP9BO43861 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
ATP9BO43861 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP9BO43861 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP9BO43861 Z83836.1-201ENST00000624605 1642 ntBASIC18.61■□□□□ 0.57
ATP9BO43861 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP9BO43861 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP9BO43861 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP9BO43861 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP9BO43861 IGHGP-201ENST00000390555 1178 ntBASIC18.61■□□□□ 0.57
ATP9BO43861 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATP9BO43861 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP9BO43861 HCG4P8-203ENST00000443049 980 ntBASIC18.61■□□□□ 0.57
ATP9BO43861 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP9BO43861 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATP9BO43861 KRT18P56-201ENST00000507275 550 ntBASIC18.61■□□□□ 0.57
ATP9BO43861 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.61■□□□□ 0.57
ATP9BO43861 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATP9BO43861 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATP9BO43861 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP9BO43861 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ATP9BO43861 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATP9BO43861 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP9BO43861 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP9BO43861 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP9BO43861 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP9BO43861 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP9BO43861 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
ATP9BO43861 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP9BO43861 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP9BO43861 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ATP9BO43861 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 CHCHD2P8-201ENST00000429873 447 ntBASIC18.6■□□□□ 0.57
ATP9BO43861 AP002383.4-201ENST00000442518 975 ntBASIC18.6■□□□□ 0.57
ATP9BO43861 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP9BO43861 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP9BO43861 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.6■□□□□ 0.57
ATP9BO43861 GPR32P1-201ENST00000601788 811 ntBASIC18.6■□□□□ 0.57
ATP9BO43861 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
ATP9BO43861 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.6■□□□□ 0.57
ATP9BO43861 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP9BO43861 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATP9BO43861 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
ATP9BO43861 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP9BO43861 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP9BO43861 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP9BO43861 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP9BO43861 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms