Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
UPK1AO00322 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
UPK1AO00322 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.06■□□□□ 0.32
UPK1AO00322 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
UPK1AO00322 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.06■□□□□ 0.32
UPK1AO00322 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 AC005521.1-201ENST00000393351 872 ntBASIC17.06■□□□□ 0.32
UPK1AO00322 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.06■□□□□ 0.32
UPK1AO00322 COX11P1-201ENST00000489116 835 ntBASIC17.06■□□□□ 0.32
UPK1AO00322 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.06■□□□□ 0.32
UPK1AO00322 AC140113.3-201ENST00000605663 199 ntBASIC17.06■□□□□ 0.32
UPK1AO00322 LINC01023-201ENST00000606054 436 ntBASIC17.06■□□□□ 0.32
UPK1AO00322 AL031432.5-201ENST00000641059 760 ntBASIC17.06■□□□□ 0.32
UPK1AO00322 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
UPK1AO00322 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UPK1AO00322 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.06■□□□□ 0.32
UPK1AO00322 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.06■□□□□ 0.32
UPK1AO00322 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK1AO00322 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.05■□□□□ 0.32
UPK1AO00322 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UPK1AO00322 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
UPK1AO00322 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.05■□□□□ 0.32
UPK1AO00322 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
UPK1AO00322 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.05■□□□□ 0.32
UPK1AO00322 BX664615.1-201ENST00000443558 458 ntBASIC17.05■□□□□ 0.32
UPK1AO00322 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.05■□□□□ 0.32
UPK1AO00322 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.05■□□□□ 0.32
UPK1AO00322 AL441883.1-201ENST00000566170 1045 ntBASIC17.05■□□□□ 0.32
UPK1AO00322 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.05■□□□□ 0.32
UPK1AO00322 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UPK1AO00322 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
UPK1AO00322 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.05■□□□□ 0.32
UPK1AO00322 NKILA-202ENST00000614771 2598 ntBASIC17.05■□□□□ 0.32
UPK1AO00322 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UPK1AO00322 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK1AO00322 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.04■□□□□ 0.32
UPK1AO00322 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
UPK1AO00322 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.04■□□□□ 0.32
UPK1AO00322 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.04■□□□□ 0.32
UPK1AO00322 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
UPK1AO00322 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.04■□□□□ 0.32
UPK1AO00322 AC139887.4-201ENST00000607877 719 ntBASIC17.04■□□□□ 0.32
UPK1AO00322 AC011558.1-201ENST00000623459 338 ntBASIC17.04■□□□□ 0.32
UPK1AO00322 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UPK1AO00322 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UPK1AO00322 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UPK1AO00322 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.04■□□□□ 0.32
UPK1AO00322 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UPK1AO00322 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK1AO00322 AC011676.5-201ENST00000624864 2660 ntBASIC17.04■□□□□ 0.32
UPK1AO00322 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.03■□□□□ 0.32
UPK1AO00322 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1AO00322 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
UPK1AO00322 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms