Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC125634.1-201ENST00000438758 1403 ntBASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC091607.1-201ENST00000490318 1060 ntBASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC011840.4-201ENST00000578471 627 ntBASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 AP005901.3-202ENST00000581653 237 ntBASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 AP002414.4-201ENST00000589764 1148 ntBASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 AL138831.2-201ENST00000606564 490 ntBASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 KRT18P1-202ENST00000452408 1331 ntBASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-4A0A0C4DH59 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC233702.3-201ENST00000578656 1387 ntBASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV5-4A0A0C4DH59 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TRBV5-4A0A0C4DH59 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV5-4A0A0C4DH59 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms