Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 TSPY22P-201ENST00000427496 604 ntBASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 HLA-F-220ENST00000434407 884 ntBASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 AP000867.3-201ENST00000524675 377 ntBASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 AL136038.4-201ENST00000603606 1261 ntBASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHB1Q9Y5F3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 NOC2LP2-201ENST00000407594 1944 ntBASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 TSPY19P-201ENST00000418461 509 ntBASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 TSPY18P-201ENST00000441642 509 ntBASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 LINC00265-3P-201ENST00000447588 903 ntBASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 TPSP2-201ENST00000561760 610 ntBASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHB1Q9Y5F3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 KRT89P-201ENST00000620027 1478 ntBASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 AC079781.3-201ENST00000449110 356 ntBASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB1Q9Y5F3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms