Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 AL645608.8-201ENST00000606034 2086 ntBASIC16.98■□□□□ 0.31
RNF6Q9Y252 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.98■□□□□ 0.31
RNF6Q9Y252 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
RNF6Q9Y252 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF6Q9Y252 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 AC112777.1-201ENST00000540175 1423 ntBASIC16.96■□□□□ 0.31
RNF6Q9Y252 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 AC008622.2-201ENST00000617006 1229 ntBASIC16.96■□□□□ 0.31
RNF6Q9Y252 AC093458.2-201ENST00000623150 629 ntBASIC16.96■□□□□ 0.31
RNF6Q9Y252 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF6Q9Y252 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 AC124067.4-201ENST00000519691 2379 ntBASIC16.96■□□□□ 0.31
RNF6Q9Y252 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF6Q9Y252 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF6Q9Y252 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF6Q9Y252 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF6Q9Y252 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF6Q9Y252 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF6Q9Y252 KRT8P11-201ENST00000409686 1436 ntBASIC16.96■□□□□ 0.3
RNF6Q9Y252 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.96■□□□□ 0.3
RNF6Q9Y252 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF6Q9Y252 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF6Q9Y252 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms