Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 GPR32P1-201ENST00000601788 811 ntBASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 AP001005.1-201ENST00000571755 1248 ntBASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 RCC2P3-201ENST00000418112 1537 ntBASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NOTCH3Q9UM47 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 AL049812.1-201ENST00000432563 2267 ntBASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 HMGN1P19-201ENST00000436976 333 ntBASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 HNRNPDP1-201ENST00000439535 754 ntBASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 AP003733.1-201ENST00000491725 852 ntBASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 AC005082.1-201ENST00000413042 2259 ntBASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NOTCH3Q9UM47 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NOTCH3Q9UM47 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 NFIC-211ENST00000641145 8399 ntBASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 FP475955.4-201ENST00000623131 1990 ntBASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 GUSBP12-201ENST00000513727 720 ntBASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.89□□□□□ -0.19
NOTCH3Q9UM47 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms