Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 AC096633.1-201ENST00000422446 749 ntBASIC18.98■□□□□ 0.63
CDH9Q9ULB4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 AL020996.1-203ENST00000536896 2307 ntBASIC18.98■□□□□ 0.63
CDH9Q9ULB4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH9Q9ULB4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 INTS4P1-201ENST00000438455 1935 ntBASIC18.96■□□□□ 0.63
CDH9Q9ULB4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 BICD1-207ENST00000551848 1962 ntBASIC18.96■□□□□ 0.63
CDH9Q9ULB4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 FAAHP1-202ENST00000446499 1238 ntBASIC18.96■□□□□ 0.63
CDH9Q9ULB4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CDH9Q9ULB4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 FLJ13224-201ENST00000313737 1514 ntBASIC18.95■□□□□ 0.62
CDH9Q9ULB4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH9Q9ULB4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms