Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 AL353692.3-201ENST00000407031 1396 ntBASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 IGHV3-41-201ENST00000613121 348 ntBASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 AC004263.2-201ENST00000617183 678 ntBASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 LINC01126-201ENST00000623515 1646 ntBASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF3C4Q9UKN8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 AC090616.6-201ENST00000582640 721 ntBASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 CLEC4GP1-201ENST00000596555 870 ntBASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 AC093010.1-201ENST00000473625 1624 ntBASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF3C4Q9UKN8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms