Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 AL022342.1-201ENST00000400363 863 ntBASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 MINOS1P3-201ENST00000457048 203 ntBASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 AC079776.4-201ENST00000511039 504 ntBASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
HDAC6Q9UBN7 AC067852.2-201ENST00000590513 2313 ntBASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 AP000997.3-201ENST00000623333 2250 ntBASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 AL662844.1-201ENST00000546340 181 ntBASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 REXO1L6P-202ENST00000619970 1078 ntBASIC20.33■□□□□ 0.85
HDAC6Q9UBN7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HDAC6Q9UBN7 AC099343.3-201ENST00000605834 2503 ntBASIC20.33■□□□□ 0.84
HDAC6Q9UBN7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HDAC6Q9UBN7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
HDAC6Q9UBN7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HDAC6Q9UBN7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.33■□□□□ 0.84
HDAC6Q9UBN7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HDAC6Q9UBN7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 SAPCD2P3-201ENST00000455031 850 ntBASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 AF238378.1-201ENST00000526806 358 ntBASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDAC6Q9UBN7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms