Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCF3Q9NUQ8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.33■□□□□ 0.53
ABCF3Q9NUQ8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.33■□□□□ 0.53
ABCF3Q9NUQ8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ABCF3Q9NUQ8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.33■□□□□ 0.53
ABCF3Q9NUQ8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.33■□□□□ 0.53
ABCF3Q9NUQ8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ABCF3Q9NUQ8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ABCF3Q9NUQ8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
ABCF3Q9NUQ8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ABCF3Q9NUQ8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ABCF3Q9NUQ8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ABCF3Q9NUQ8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ABCF3Q9NUQ8 AP001094.4-201ENST00000579008 2176 ntBASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ABCF3Q9NUQ8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.31■□□□□ 0.52
ABCF3Q9NUQ8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms