Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 HLA-F-220ENST00000434407 884 ntBASIC16.97■□□□□ 0.31
KLHL1Q9NR64 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 FER1L4-210ENST00000615531 5998 ntBASIC16.97■□□□□ 0.31
KLHL1Q9NR64 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KLHL1Q9NR64 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 AC092329.2-201ENST00000598402 547 ntBASIC16.96■□□□□ 0.31
KLHL1Q9NR64 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 AC016734.2-201ENST00000624325 1377 ntBASIC16.96■□□□□ 0.31
KLHL1Q9NR64 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
KLHL1Q9NR64 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KLHL1Q9NR64 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
KLHL1Q9NR64 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
KLHL1Q9NR64 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KLHL1Q9NR64 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
KLHL1Q9NR64 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
KLHL1Q9NR64 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
KLHL1Q9NR64 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.95■□□□□ 0.3
KLHL1Q9NR64 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 AL450487.1-201ENST00000426799 995 ntBASIC16.95■□□□□ 0.3
KLHL1Q9NR64 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 NPAP1P7-201ENST00000613027 823 ntBASIC16.95■□□□□ 0.3
KLHL1Q9NR64 AC068587.9-201ENST00000641814 219 ntBASIC16.95■□□□□ 0.3
KLHL1Q9NR64 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
KLHL1Q9NR64 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms