Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRCC1Q9NPI7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRCC1Q9NPI7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KRCC1Q9NPI7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.55■□□□□ 0.24
KRCC1Q9NPI7 AC006116.8-202ENST00000587620 1550 ntBASIC16.55■□□□□ 0.24
KRCC1Q9NPI7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRCC1Q9NPI7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KRCC1Q9NPI7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 AL023803.3-201ENST00000615559 522 ntBASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.54■□□□□ 0.24
KRCC1Q9NPI7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 AC012317.2-201ENST00000623305 2251 ntBASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 MIR718-201ENST00000390190 70 ntBASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 AP003071.4-201ENST00000562276 1284 ntBASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 C2orf69P3-201ENST00000565542 1120 ntBASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRCC1Q9NPI7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 AC099343.3-201ENST00000605834 2503 ntBASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRCC1Q9NPI7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms